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Faculty of Mathematics

 

Career

  • 1997-2000 Wellcome Trust Fellow in Mathematical Biology, Edinburgh
  • 2000-2001 Lecturer, School of Informatics, Edinburgh
  • 2001-2004 Wellcome Trust Travelling Fellowship, St Louis and Edinburgh
  • 2004-2006 Lecturer, DAMTP
  • 2006-2015 Senior Lecturer, DAMTP
  • 2015- Reader. DAMTP

Research

Stephen Eglen is a computational neuroscientist: he uses computational methods to study the development of the nervous system, using mostly the retina and other parts of the visual pathway as a model system. He is particularly interested in questions of structural and functional development:

Structural development: how do retinal neurons acquire their positional information within a circuit?

Functional development: what are the mechanisms by which neurons make contact with each other, to perform functioning circuits?

Selected Publications

Please see my publications page

Publications

A Quick Guide to Teaching R Programming to Computational Biology Students.
SJ Eglen
– PLOS Computational Biology
(2009)
5,
e1000482
Analysis of spontaneous activity patterns in developing retina: algorithms and results
JD Simonotto, SJ Eglen, M Kaiser, C Adams, E Sernagor
– BMC Neuroscience
(2009)
10,
p66
Lateral cell movement driven by dendritic interactions is sufficient to form retinal mosaics
SJ Eglen, A van Ooyen, DJ Willshaw
– Network Computation in Neural Systems
(2009)
11,
103
Lateral cell movement driven by dendritic interactions is sufficient to form retinal mosaics
SJ Eglen, A van Ooyen, DJ Willshaw
– Network: Computation in Neural Systems
(2009)
11,
103
The Role of Simplifying Models in Neuroscience: Modelling Structure and Function.
DM Kronhaus, SJ Eglen
– Lecture Notes in Computer Science Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics
(2008)
5151,
33
Analysis of spatial relationships in three dimensions: tools for the study of nerve cell patterning.
SJ Eglen, DD Lofgreen, MA Raven, BE Reese
– BMC neuroscience
(2008)
9,
68
Spatial constraints underlying the retinal mosaics of two types of horizontal cells in cat and macaque.
SJ Eglen, JCT Wong
– Vis Neurosci
(2008)
25,
209
Retinal development
E Sernagor, S Eglen, B Harris, R Wong
(2006)
1
Retinal mosaics
SJ Eglen, L Galli-Resta
(2006)
193
Development of regular cellular spacing in the retina: theoretical models
SJ Eglen
– Mathematical medicine and biology : a journal of the IMA
(2006)
23,
79
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Research Group

Computational Biology

Room

G0.11