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Faculty of Mathematics

 

Publications

SCOTTI: Efficient Reconstruction of Transmission within Outbreaks with the Structured Coalescent.
N De Maio, C-H Wu, DJ Wilson
– PLOS Computational Biology
(2016)
12,
e1005130
Reversible polymorphism-aware phylogenetic models and their application to tree inference.
D Schrempf, BQ Minh, N De Maio, A von Haeseler, C Kosiol
– J Theor Biol
(2016)
407,
362
Evolutionary History of the Global Emergence of the Escherichia coli Epidemic Clone ST131
N Stoesser, AE Sheppard, L Pankhurst, N De Maio, CE Moore, R Sebra, P Turner, LW Anson, A Kasarskis, EM Batty, V Kos, DJ Wilson, R Phetsouvanh, D Wyllie, E Sokurenko, AR Manges, TJ Johnson, LB Price, TEA Peto, JR Johnson, X Didelot, AS Walker, DW Crook, Modernizing Medical Microbiology Informatics Group (MMMIG)
– mBio
(2016)
7,
10.1128/mbio.02162
SimBac: simulation of whole bacterial genomes with homologous recombination
T Brown, X Didelot, DJ Wilson, ND Maio
– Microbial Genomics
(2016)
2,
10.1099/mgen.0.000044
New Routes to Phylogeography: A Bayesian Structured Coalescent Approximation.
N De Maio, C-H Wu, KM O'Reilly, D Wilson
– PLoS Genet
(2015)
11,
e1005421
PoMo: An Allele Frequency-Based Approach for Species Tree Estimation.
N De Maio, D Schrempf, C Kosiol
– Syst Biol
(2015)
64,
1018
VARIATION IN THERMAL PERFORMANCE AND REACTION NORMS AMONG POPULATIONS OF DROSOPHILA MELANOGASTER
P Klepsatel, M Gáliková, N De Maio, CD Huber, C Schlötterer, T Flatt
– Evolution
(2013)
67,
3573
Linking Great Apes Genome Evolution across Time Scales Using Polymorphism-Aware Phylogenetic Models
N De Maio, C Schlötterer, C Kosiol
– Molecular Biology and Evolution
(2013)
30,
2249
Reproductive and post-reproductive life history of wild-caught Drosophila melanogaster under laboratory conditions
P Klepsatel, M Gáliková, N De Maio, S Ricci, C Schlötterer, T Flatt
– J Evol Biol
(2013)
26,
1508
Estimating Empirical Codon Hidden Markov Models
N De Maio, I Holmes, C Schlötterer, C Kosiol
– Molecular Biology and Evolution
(2012)
30,
725
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Room

G1.17