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Faculty of Mathematics

 

Professor Stephen John Eglen

Career

  • 1997-2000 Wellcome Trust Fellow in Mathematical Biology, Edinburgh
  • 2000-2001 Lecturer, School of Informatics, Edinburgh
  • 2001-2004 Wellcome Trust Travelling Fellowship, St Louis and Edinburgh
  • 2004-2006 Lecturer, DAMTP
  • 2006-2015 Senior Lecturer, DAMTP
  • 2015- Reader. DAMTP

Research

Stephen Eglen is a computational neuroscientist: he uses computational methods to study the development of the nervous system, using mostly the retina and other parts of the visual pathway as a model system. He is particularly interested in questions of structural and functional development:

Structural development: how do retinal neurons acquire their positional information within a circuit?

Functional development: what are the mechanisms by which neurons make contact with each other, to perform functioning circuits?

Selected Publications

Please see my publications page

Publications

A comparison of computational methods for detecting bursts in neuronal spike trains and their application to human stem cell-derived neuronal networks.
E Cotterill, P Charlesworth, CW Thomas, O Paulsen, SJ Eglen
– Journal of neurophysiology
(2016)
116,
306
(doi: 10.1152/jn.00093.2016)
Ten Simple Rules for Taking Advantage of git and GitHub
Y Perez-Riverol, L Gatto, R Wang, T Sachsenberg, J Uszkoreit, F da Veiga Leprevost, C Fufezan, T Ternent, SJ Eglen, DS Katz, TJ Pollard, A Konovalov, RM Flight, K Blin, JA Vizcaino
(2016)
048744
(doi: 10.1101/048744)
Bivariate spatial point patterns in the retina: a reproducible review
SJ Eglen
– Journal de la Société Française de Statistique
(2016)
157,
33
Homeostatic Activity-Dependent Tuning of Recurrent Networks for Robust Propagation of Activity.
J Gjorgjieva, JF Evers, SJ Eglen
– The Journal of neuroscience : the official journal of the Society for Neuroscience
(2016)
36,
3722
(doi: 10.1523/JNEUROSCI.2511-15.2016)
Characterization of Early Cortical Neural Network Development in Multiwell Microelectrode Array Plates.
E Cotterill, D Hall, K Wallace, WR Mundy, SJ Eglen, TJ Shafer
– SLAS Discovery
(2016)
21,
510
(doi: 10.1177/1087057116640520)
Towards standard practices for sharing computer code and programs in neuroscience
SJ Eglen, B Marwick, YO Halchenko, M Hanke, S Sufi, P Gleeson, RA Silver, AP Davison, L Lanyon, M Abrams, T Wachtler, DJ Willshaw, C Pouzat, J-B Poline
(2016)
(doi: 10.1101/045104)
Geniculo-Cortical projection diversity revealed within the mouse visual thalamus
MN Leiwe, AC Hendry, AD Bard, SJ Eglen, AS Lowe, ID Thompson
– PLoS One
(2016)
11,
e0144846
(doi: 10.1371/journal.pone.0144846)
Requirements for storing electrophysiology data.
FT Sommer, T Wachtler, JL Teeters, J Benda, AP Davison, SJ Eglen, RC Gerkin, JS Grethe, J Grewe, KD Harris, CJ Kellner, YL Franc, R Moucek, D Prodanov, R Pröpper, HL Sessions, L Smith, A Sobolev, A Stoewer, B Wark
– CoRR
(2016)
abs/1605.07673,
Homeostatic activity-dependent tuning of recurrent networks for robust propagation of activity
J Gjorgjieva, JF Evers, SJ Eglen
(2015)
(doi: 10.1101/033548)
Estimating the location and size of retinal injections from orthogonal images of an intact retina.
JJJ Hjorth, E Savier, DC Sterratt, M Reber, SJ Eglen
– BMC neuroscience
(2015)
16,
80
(doi: 10.1186/s12868-015-0217-8)
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Research Group

Computational Biology

Email

S.J.Eglen@damtp.cam.ac.uk

Room

G0.11

Personal homepage

http://www.damtp.cam.ac.uk/user/sje30/

Study at Cambridge

About the University

Research at Cambridge