Gamze is an Assistant Professor in the Department of Applied Mathematics and Theoretical Physics at the University of Cambridge. She previously served as the Herbert Irving Assistant Professor in the Department of Biomedical Informatics at Columbia University. Prior to joining Columbia, she completed a K99/R00 postdoctoral fellowship in computational biology at Yale University and earned her Ph.D. in Bioinformatics from the University of Illinois at Chicago. Further information on her group and her research can be found at g2lab.org
Publications
ScatTR: Estimating the Size of Long Tandem Repeat Expansions from Short-Reads
(2025)
15647,
362
(doi: 10.1007/978-3-031-90252-9_40)
On the Overflow and p-adic Theory Applied to Homomorphic Encryption
(2025)
15349,
268
(doi: 10.1007/978-3-031-76934-4_18)
SQUiD: ultra-secure storage and analysis of genetic data for the advancement of precision medicine.
– Genome Biology
(2024)
25,
314
(doi: 10.1186/s13059-024-03447-9)
Paired CRISPR screens to map gene regulation in cis and trans.
– bioRxiv
(2024)
2024.11.27.625752
(doi: 10.1101/2024.11.27.625752)
Private information leakage from single-cell count matrices.
– Cell
(2024)
187,
6537
(doi: 10.1016/j.cell.2024.09.012)
A framework for sharing of clinical and genetic data for precision medicine applications.
– Nature medicine
(2024)
30,
3578
(doi: 10.1038/s41591-024-03239-5)
Privacy-preserving model evaluation for logistic and linear regression using homomorphically encrypted genotype data.
– Journal of biomedical informatics
(2024)
156,
104678
(doi: 10.1016/j.jbi.2024.104678)
Assessing and mitigating privacy risks of sparse, noisy genotypes by local alignment to haplotype databases.
– Genome Res
(2023)
33,
2156
(doi: 10.1101/gr.278322.123)
The EN-TEx resource of multi-tissue personal epigenomes & variant-impact models.
– Cell
(2023)
186,
1493
(doi: 10.1016/j.cell.2023.02.018)
LDmat: efficiently queryable compression of linkage disequilibrium matrices.
– Bioinformatics (Oxford, England)
(2023)
39,
btad092
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